Is this a tales_msa object?

Is this a tales_msa object?

Usage

is_tales_msa(x)

Arguments

x

An object.

Value

A logical scalar.

See also

Other TALE alignment: as.matrix.tales_msa(), tales_align(), tales_consensus(), tales_consensus_match(), tales_msa(), tales_msa_params(), tales_msa_width(), validate_tales_msa()

Examples

aligned <- data.frame(
  array_id = c("A1", "A1", "A1", "A2", "A2"),
  position_in_array = c(1L, 2L, 3L, 1L, 2L),
  alignment_position = c(1L, 2L, 3L, 1L, 3L),
  rvd = c("NTERM", "HD", "CTERM", "NTERM", "CTERM")
)
msa <- tales_msa(aligned)
is_tales_msa(msa)
#> [1] TRUE
is_tales_msa(as_tales(msa)) # back to a plain tales
#> [1] FALSE